Publications

Shawn Bowers, Timothy McPhillips, and Bertram Ludäscher. (2018). Validation and Inference of Schema-Level Workflow Data-Dependency Annotations, 7th Intl. Provenance and Annotation Workshop (IPAW) https://arxiv.org/abs/1807.09899

Adam Brinckman, Kyle Chard, Niall Gaffney, Mihael Hategan, Matthew B. Jones, Kacper Kowalik, Sivakumar Kulasekaran, Bertram Ludäscher, Bryce D. Mecum, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Kandace Turner. (2017). Computing environments for reproducibility: Capturing the ‘‘Whole Tale’’, Future Generation Computer Systems https://doi.org/10.1016/j.future.2017.12.029

Adam Brinckman, Kyle Chard, Niall Gaffney, Mihael Hategan, Matthew B. Jones, Kacper Kowalik, Sivakumar Kulasekaran, Bertram Ludäscher, Bryce Mecum, Jaroslaw Nabrzyski, Victoria Stodden, Ian Taylor, Matthew Turk, and Kandace Turner. (2017). The Whole Tale: Merging Science and Cyberinfrastructure Pathways, Globus World/NDS Workshop

Kyle Chard. (2017). The Whole Tale: Merging Science and Cyberinfrastructure Pathways, National Data Service Workshop

Kyle Chard. (2017). The Whole Tale: Merging Science and Cyberinfrastructure Pathways, Nordic e-Infrastructure conference (NEIC)

Kyle Chard, Niall Gaffney, Matthew B. Jones, Kacper Kowalik, Bertram Ludäscher, Jarek Nabrzyski, Victoria Stodden, Ian Taylor, Thomas Thelen, Matthew J. Turk, Craig Willis (2019). Application of BagIt-Serialized Research Object Bundles for Packaging and Re-execution of Computational Analyses. In Proceedings of the IEEE 15th International Conference on e-Science (e-Science) https://doi.org/10.1109/eScience.2019.00068

Jarek Nabrzyski. (2017). The Whole Tale: Merging Science and Cyberinfrastructure Pathways, PressQT Notre Dame

Matthew Jones. (2018). Provenance tracking and display in DataONE, Earth Data Provenance Workshop https://esipfed.github.io/Earth-Data-Provenance-Workshop/

Kacper Kowalik. (2018). Sneaking Data into Containers with the Whole Tale, SciPy‘18 https://scipy2018.scipy.org/ehome/index.php?eventid=299527&tabid=712461&cid=2233540&sessionid=21615725&sessionchoice=1&

Bertram Ludäscher. (2017). Workflows, Provenance, & Reproducibility: Telling the Whole Tale behind a Paleoclimate Reconstruction, EarthCube All Hands Meeting https://www.earthcube.org/2017AHMResources

Bertram Ludäscher. (2017). From Provenance Standards and Tools to Queries and Actionable Provenance, American Geophysical Union, Fall Meeting 2017, abstract #IN42C-02 http://adsabs.harvard.edu/abs/2017AGUFMIN42C..02L

Bertram Ludäscher. (2018). Whole Tale: The Experience of Research through reproducible, computational narratives, Building a Community to Advance and Sustain Digitized Biocollections (BCoN) meeting https://www.slideshare.net/ludaesch/wholetale-the-experience-of-research-88002697

Niall Gaffney. (2018). Improving Research Outcomes, Leveraging Digital Libraries, Advanced Computing and Data, JCDL 2018

Bertram Ludäscher. (2018). From Workflows to Provenance and Reproducibility: Looking Back and Forth, 7th Intl. Provenance and Annotation Workshop (IPAW) http://provenanceweek2018.org/ipaw/

Bertram Ludäscher and Santiago Núñez-Corrales. (2018). Dissecting Reproducibility: A case study with ecological niche models in the Whole Tale environment, Hierarchy of Hypotheses Workshop (HoH3) https://www.slideshare.net/ludaesch/dissecting-reproducibility-a-case-study-with-ecological-niche-models-in-the-whole-tale-environment

Timothy M. McPhillips, Craig Willis, Michael R. Gryk, Santiago Núñez-Corrales, Bertram Ludäscher (2019): Reproducibility by Other Means: Transparent Research Objects. In Proceedings of the IEEE 15th International Conference on e-Science (e-Science) https://doi.org/10.1109/eScience.2019.00068

B Mecum, S Wyngaard, C Willis, M Turk, T Thelen, I Taylor, V Stodden, D Perez, J Nabrzyski, B Ludaescher, S Kulasekaran, K Kowalik, MB Jones, M Hategan, N Gaffney, K Chard, A Brinckman. (2018). Science, containerized: Integrating provenance and compute environments with the Whole Tale, American Geophysical Union, Fall Meeting 2018, Washington DC http://adsabs.harvard.edu/abs/2018AGUFMIN53A..02M

Bryce Mecum, Matthew Jones, Dave Vieglais and Craig Willis. (2018). Preserving Reproducibility: Provenance and Executable Containers in DataONE Data Packages, 2018 IEEE 14th International Conference on e-Science (e-Science) https://doi.org/10.1109/eScience.2018.00019

Victoria Stodden. (2017). The Role of Cyberinfrastructure in Reproducible Science, Chameleon User Meeting

Victoria Stodden. (2017). Toward a Reproducible Scholarly Record, Dataverse Community Meeting

Victoria Stodden. (2017). Implementing Reproducible Computationally-Enabled Science, Institute for Advanced Computational Science

Victoria Stodden. (2017). Reproducibility in Computationally-Enabled Research: Integrating Tools and Skills, METRICS Seminar

Victoria Stodden. (2017). Data-Sharing and Reproducibility, National Academy of Sciences

Victoria Stodden. (2017). Research Data Management Implementations:Towards the Reproducibility of Science, RDMI Workshop

Victoria Stodden. (2017). Reproducibility in Computationally-Enabled Research, The Judith Resnik Year of Women in ECE Seminar

Victoria Stodden. (2018). Infrastructure for Enabling Reproducibility in Computational and Data-enabled Science, Biostatistics Seminar Northwestern Preventive Medicine https://www.preventivemedicine.northwestern.edu/divisions/biostatistics/seminars.html

Victoria Stodden. (2018). Open Data, Code, and Computational Reproducibility, CMU Open Science Symposium https://events.mcs.cmu.edu/oss2018/

Victoria Stodden. (2018). Enabling Reproducibility in Computational and Data-enabled Science, Ecole Polytechnique Federale de Lausanne https://memento.epfl.ch/event/enabling-reproducibility-in-computational-and-da-3/

Victoria Stodden. (2018). Enablilng Reproducibiolity in Computational and Data-enabled Science, Workshop II HPC and Data Science for Scientific Discovery. Part of the Long Program: Science at Extreme Scales: Where Big Data Meetrs Large-Scale Computing https://www.ipam.ucla.edu/programs/workshops/workshop-ii-hpc-and-data-science-for-scientific-discovery/

Matt Turk, Kacper Kowalik. (2018). Sneaking Data into Containers with the Whole Tale, SciPy2018

Craig Willis. (2018). The Whole Tale: Merging Science and Cyberinfrastructure Pathways, NDS/MBDH Data Science Tools & Methods Workshop http://www.nationaldataservice.org/get_involved/events/DataScienceTools/

Craig Willis, Kacper Kowalik. (2018). Container applications in research computing and research data access, PEARC‘18 https://pearc18.conference-program.com/?page_id=10&id=pan109&sess=sess155

Craig Willis. (2018). The Whole Tale: Merging Science and Cyberinfrastructure Pathways, PresQT 2018